PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN00301.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 219aa    MW: 24739.1 Da    PI: 5.8289
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN00301.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.5e-0665113454
                 HHHHHHHHHHHHHHHH.HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsa.feeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RR+r+N++ f  L ++l +    +  + +K +iL  A++ +++L
  KHN00301.1  65 SKACREKLRRERLNERqFCDLSSVLEPG---RPVRTDKPAILDDAIRVLSQL 113
                 5678**********9758*********8...89*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.13E-558118No hitNo description
PROSITE profilePS508888.9561113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-867140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-467119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-669134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDSLEDSGYW DFLDYSFIDQ APPDFLWSNN TISVSTEVDI PGDAAACQEN TKKRGHADSS  60
CKVGSKACRE KLRRERLNER QFCDLSSVLE PGRPVRTDKP AILDDAIRVL SQLKTEAQEL  120
KKTNEKLLEE IKCLKAEKNE LREEKLVLKA DKERIEKQLK ALPVAPAGYM TPPVAAAAYQ  180
AGVNKMALYP NYGYIPMWQY LPQSVRDTSH DHELRPPAA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0969980.0BT096998.1 Soybean clone JCVI-FLGm-15J2 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003535811.11e-159PREDICTED: transcription factor bHLH104-like isoform X1
SwissprotQ8L4676e-71BH104_ARATH; Transcription factor bHLH104
TrEMBLA0A0B2NT591e-163A0A0B2NT59_GLYSO; Transcription factor bHLH104
STRINGGLYMA10G01010.11e-159(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81792537
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.22e-53bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]